Answer Booms question , and oh yea the <HLServer / Mod Folder> is your games folder , the game your running your server on either Counter-Strike or Day of Defeat etc... if you're running it on CS it should be like this if you just installed one of these types of servers :
Client Dedicated Server ( The one from Steam Games list ) :
Standalone Dedicated Server ( The one you download from the internet and it isn't accessed from your Steam Games list ) :
If your installing for Day of Defeat , then change \Cstrike to \Dod.