+mapcyclefile mapcycle2.txt
I think this is bad way of doing.Try to add this to start up line for example mine:
screen -A -m -d -S minigames ./srcds_run -game cstrike +maxplayers 32 +ip MineGoodIPhere +port 27015 +map bob2 +sm_basepath addons/minigames +sm_corecfgfile addons/minigames/configs/core.cfg +servercfgfile minigames.cfg +mapcyclefile minigames.txt
Ofcourse it won't fit you maybe, because I use it on Counter-Strike: Source
If you use windows than just add +mapcyclefile mapcycle2.txt in start up line just don't add it in .cfg files
You may read about csgo startup line here:
http://csgodev.com/csgo-server-command-line-options/